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Colloquium
Traveling waves and instabilities in an expanding bacterial colony

日期:2014-06-11 阅读:881

摘要

Pattern formation is a fundamental process in embryogenesis and development. In his seminal paper half a century ago, Turing proposed a mechanism for spontaneous pattern formation in biological systems that involve the diffusion of two types of morphogens (“activator” and “inhibitor”) whose interaction stimulates their own synthesis. Starting from random initial perturbations, the Turing model typically generates patterns via the development of finite-wavelength dynamical instabilities in confined geometries. Recently, a collaboration led by Terry Hwa at UCSD and Jiandong Huang at HKU conducted experiments of pattern formation in open geometry through control of the synthetic chemotactic circuit of bacteria[1]. The growth process can be modeled quantitatively via Fisher-Kolmogorov type equations that exhibit traveling wave solutions. A key feature of the current model is a concentration-dependent diffusivity of the active species which can be tuned in the experiment through control of gene expression. Theoretical analysis of the traveling wave solution reveals key parameters that span the phase diagram of the system[2]. The autonomous diffusion control together with the open, expanding geometries offered by growing biological systems, give rise to novel strategies to generate well-defined patterns in space and time.

[1] Chenli Liu et al., Science 334, 238 (2011).
[2] Xiongfei Fu et al., Phys. Rev. Lett. 108, 198102 (2012).
 

报告人简介

汤雷翰,博士。现为北京计算科学研究中心教授,香港浸会大学教授。是国际知名理论物理学家,主要从事凝聚态物理,特别是统计物理理论在凝聚态物理中的应用的研究。他在准晶、超导、自旋玻璃、动力学生长、时空混沌、经济物理、生物物理的解析理论和数值模拟研究中取得了重要成果。

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